THE UNITED STATES NEEDS TO STEP UP ITS RESPONSE TO BIRD FLU

full moon in the sky

By Michaela Simoneau, Sophia Hirshfield, and Maclane Speer

As 2024 closes, the United States continues to fall short in its management of the threat posed by bird flu, or H5N1. The virus causes regular outbreaks in wild birds and livestock across the world that generate serious agricultural and economic disruptions. But H5N1 can also spill over from birds to infect other animals, including humans.

On March 24, 2024, the virus was detected among dairy cows for the first time in the United States. Since then, the U.S. Centers for Disease Control and Prevention (CDC) has reported 61 human cases of H5N1 across eight states. For now, the risk of H5N1 to the general public appears to remain low, as the virus does not spread easily between people.

Recently, human cases of unknown origin in Missouri, California, and Vancouver have raised alarm bells that the virus might develop the capability for human-to-human transmission, which in turn might unleash a larger epidemic. The virus’s potential to rapidly mutate and cause high mortality rates among people—up to 50 percent—has had public health experts on high alert.

No one can reliably predict whether or when the current outbreak will evolve into a more serious threat to human health. Since 1997, there have been several scares from H5N1 when the virus did not develop the ability to pass between people, and this pattern is not well understood. But if H5N1 did cross that threshold, it is unlikely U.S. officials would be able to detect it in time to mobilize an effective response.

Since the turn of the century, every presidential administration has highlighted gaps in U.S. public health capabilities, and every Congress has left them underfunded. The H5N1 outbreak has revealed the resulting and dangerous shortcomings in U.S. pandemic preparedness: lagging data, incomplete surveillance, sluggish coordination, considerable mistrust, and insufficient planning and stockpiling of vaccines and therapies. That poor performance cuts across political parties, the federal interagency, and state leadership. Multiple players have sought to downplay the threat: the dairy industry fears further economic setbacks, state leaders are wary of federal intervention, and the Biden administration did not want to aggravate relations during the 2024 election cycle.

It is not too late to change course. Strong interagency, interstate, and global coordination; better protections for farm workers; accelerated planning and investment in surveillance; and the development and promotion of better vaccines and therapies remain the essential elements to prevent the sustained spread of H5N1.

THE SCOPE OF THE THREAT

It is important not to be alarmist. An additional mutation or mutations would need to occur for the current strain in dairy cows—or that circulating in wild birds—to become well adapted to human-to-human transmission.

Human cases have been mostly mild so far, with patients presenting with conjunctivitis and sometimes respiratory symptoms. However, this reality could change quickly, as evidenced by a serious case in a critically ill teenager in Vancouver, and a hospitalized patient with a severe case in Louisiana.

H5N1 is extremely contagious and lethal in chickens, and poultry outbreaks cause significant agricultural and economic hardship. Farmers have to depopulate entire flocks exposed to the virus—those losses have contributed to a 30 percent rise in egg prices in the past year. The hardest hit states, such as California, which just declared a state of emergency, will take months to recover.

A farmer feeding chickens at his small egg farm in Michigan. | Modifications to photograph by Matthew Hatcher / AFP via Getty Images

A farmer feeding chickens at his small egg farm in Michigan. | Modifications to photograph by Matthew Hatcher / AFP via Getty Images

A farmer feeding chickens at his small egg farm in Michigan. | Modifications to photograph by Matthew Hatcher / AFP via Getty Images

Encouragingly, to date, most infected cows have not gotten severely ill, and the safety of the food supply chain has remained intact; humans are not at risk of getting the virus from pasteurized milk or properly prepared meat.

Scientists, veterinarians, and public health officials are concerned because the recent H5N1 outbreak in cows is not the only new development—it is one among a pattern of worrisome firsts for the virus.

H5N1 TRANSMISSION

As the virus has spread through wild birds to poultry flocks and dairy herds across the United States, H5N1 has also been detected in a growing number of wild species of mammals. It is unclear exactly how and to what extent the virus is spilling over among birds, cows, pigs, and other species.

Each new infection gives the virus an opportunity to randomly mutate as it replicates.

If different strains of the virus infect a new host at the same time, there is also a risk that genes will "reassort" while the viruses are replicating in the host cell.

The strains could swap genetic material and potentially pass on mutations that could make the virus more transmissible or lethal in humans.

Recent studies have indicated some of these mutations may already be occurring in isolated cases.

The risk of reassortment in humans rises as seasonal flu cases rise.

If a person infected with H5N1 is simultaneously infected with seasonal flu—which is already well adapted to human-to-human transmission—that creates a dangerous environment for new, potentially severe strains of H5N1 to develop.

H5N1 comes from the dangerous family of influenza viruses that have caused several modern public health emergencies. Even with that experience, officials have struggled to mobilize a serious response to H5N1.

Patients infected with H1N1 recuperate in an emergency hospital in Camp Funston, Kansas, in the midst of the 1918 pandemic. | National Museum of Health and Medicine via Picryl

Patients infected with H1N1 recuperate in an emergency hospital in Camp Funston, Kansas, in the midst of the 1918 pandemic. | National Museum of Health and Medicine via Picryl

Patients infected with H1N1 recuperate in an emergency hospital in Camp Funston, Kansas, in the midst of the 1918 pandemic. | National Museum of Health and Medicine via Picryl

CHALLENGES IN COORDINATING AN EFFECTIVE RESPONSE

The Covid-19 pandemic catalyzed key investments in outbreak response, including for disease surveillance, the development of vaccines and therapies, personal protective equipment (PPE), and greater attention to improving trust and coordination between communities, local officials, and national public health decisionmakers.

That response mainly involved the human health sector, whereas animals are the source of 75 percent of emerging infectious disease threats. In the H5N1 outbreak and increasingly in future outbreaks, public health experts should instead prepare to follow a  “One Health” approach—an integrated response among human, animal, and environmental health experts.

Executing such a coordinated response brings several new challenges.

ON THE GROUND

Since the beginning of the outbreak, there have been serious coordination challenges, with deep interagency tensions among the White House, CDC, Administration for Strategic Preparedness and Response (ASPR), and U.S. Department of Agriculture (USDA). Guidance from national-level officials has not always been clear for under-resourced veterinarians and public health officials at the local level.

The agricultural industry, USDA, and state-level agencies have mixed mandates to protect animal health while simultaneously ensuring the stability and productivity of the food market. Importantly, they are distinct from the CDC and state public health agencies with a mandate to protect human health.

A herd of cows milked at the Cornell Teaching Dairy Barn in Ithaca, New York. | Modifications to photograph by Michael M. Santiago via Getty Images

A herd of cows milked at the Cornell Teaching Dairy Barn in Ithaca, New York. | Modifications to photograph by Michael M. Santiago via Getty Images

A herd of cows milked at the Cornell Teaching Dairy Barn in Ithaca, New York. | Modifications to photograph by Michael M. Santiago via Getty Images

Officials originally hesitated to restrict the movement of herds for fear of disrupting production or alienating and losing access to farmers. While the USDA began to require H5N1 testing for lactating cattle moving across state lines in May 2024, restrictions on intra-state movement vary.

Reliable testing of both animals and at-risk humans is necessary to track exposures and viral evolution. But since farmers fear that reporting infections could risk economic losses, many have refused or delayed testing.

Farm workers with mild symptoms are unlikely to seek testing and treatment if they lack insurance or sick leave. In addition, farm workers may come from at-risk populations, including undocumented immigrants, and face language barriers or mistrust authorities.

Dairy farms do not have sufficient or consistent biosecurity measures in place to control transmission of the virus. Even with additional support from the USDA and CDC, adding PPE or cleaning protocols can be expensive and inconvenient.

Altogether, these factors have caused cases to go woefully underreported. So long as the virus is circulating—especially undetected—it has the time and potential to evolve into a more transmissible and deadly variant.

TRACKING THE VIRUS

Reliable, real-time surveillance is essential for public health officials to institute targeted, protective measures to prevent the further spread of H5N1.

However, that real-time picture does not currently exist.

Despite a strong Animal Health Laboratory Network, testing and sequencing samples from infected animals is inconsistent, and may be reported with little detail and lengthy delay.

The USDA took an important step with its new National Milk Testing Strategy, requiring dairy farms, transporters, and processing facilities to submit raw milk samples for testing and requiring cattle owners with H5-positve animals to share information for testing and surveillance. Building on lessons from milk testing in Colorado, these measures should help identify areas where H5N1 is spreading among cattle asymptomatically, and where further investigation or quarantine are needed.

On the human health side, Covid-era investments in CDC programs have enabled the testing of thousands of possible H5N1 specimens over the past 10 months. Yet those programs are limited, rely on cooperation from individual states, and are in jeopardy as supplemental pandemic funding tapers off.

H5N1 SURVEILLANCE METHODS

The United States layers various methods of surveillance from different sources,
including the examples below, to build a patchwork of situational awareness.

RT-PCR TESTING

HOW IT WORKS: Potential cases are identified by clinicians or veterinarians in primary care offices and emergency rooms. A healthcare professional collects a throat or nasal swab from a patient. Clinical, public health, or veterinary labs process samples to test for the presence of H5N1 virus.

STRENGTHS: RT-PCR testing identifies which specific individuals are infected with H5N1.

WEAKNESSES: RT-PCR testing relies on individual willingness to present for and consent to testing.

U.S. CDC, U.S. CDC Monitoring

WASTEWATER SURVEILLANCE

HOW IT WORKS: People with an H5N1 infection shed viral particles when they use the restroom, shower, or wash hands. These viral particles travel through the sewage system. Wastewater operators take samples to send to a laboratory where they are tested for H5N1.

STRENGTHS: Wastewater surveillance can detect the presence of H5N1 in a community even if people are not displaying symptoms.

WEAKNESSES: Wastewater surveillance does not specify which individuals are infected or whether the source of the viral particles is from humans, animals, or animal products.

U.S. CDC

BULK MILK TESTING

HOW IT WORKS: Bulk tanks at dairy processing facilities, containing milk from multiple cows, are tested for viral genetic material.

STRENGTHS: Bulk milk testing indicates which farm(s) have cows infected with H5N1. Milk that tests positive is discarded and does not enter the market. Bulk testing saves time and resources by not having to test individual cows.

WEAKNESSES: Bulk milk testing does not identify which individual cows are infected with H5N1 and requires follow up testing to pinpoint which animals are infected.

USDA APHIS

The CDC has issued several commercial contracts to increase diagnostic capacity in case demand spikes, and is piloting programs with pharmacies to provide free testing.

Decisionmakers need efficient surveillance to assess the risk of H5N1 to human health and to understand if the outbreak has moved into a new phase. Without those signals, there cannot be sufficient lead time to accelerate the production of critical medical countermeasures.

DEPLOYING VACCINES AND THERAPIES

Many regular tools to fight seasonal influenza remain effective against H5N1—to a point.

The CDC has broadened recommendations for Tamiflu (oseltamivir), a post-exposure prophylaxis for farm workers, which appears to remain an effective therapy against current strains of H5N1. However, it requires a prescription, and it works best when taken within 48 hours of symptom onset. Some experts worry that overreliance on Tamiflu is preventing the U.S. government from investing in the development of new, alternative therapies that could be more effective against severe cases in the event of a pandemic.

A box and tablets of Tamiflu pills. | Modifications to photograph by Nikos Pekiaridis/NurPhoto via Getty Images

A box and tablets of Tamiflu pills. | Modifications to photograph by Nikos Pekiaridis/NurPhoto via Getty Images

A box and tablets of Tamiflu pills. | Modifications to photograph by Nikos Pekiaridis/NurPhoto via Getty Images

While PPE use is recommended by the CDC and increased in some high-risk areas after H5N1 was found in cows, not all workers are willing to adhere to guidance. Environmental conditions on farms and in milking parlors can make it uncomfortable to wear certain types of PPE, especially masks and respirators.

The CDC has allocated over 100,000 doses of the seasonal influenza vaccine to 12 states with bovine cases. These vaccines do not protect workers against H5N1, but they could help reduce severe seasonal flu cases, minimizing the risk of coinfection and further reassortment with seasonal and avian influenza.

Additionally, the United States holds a reserve of human H5N1 vaccines in the Strategic National Stockpile. The federal government has pledged to increase the stockpile to 10 million doses by the spring of 2025 and has made investments to ensure that those vaccines would be ready to distribute if need be.

Given that individuals need two doses of the vaccine to develop effective immunity, the stockpile would only be sufficient to vaccinate five million people. And stockpiled vaccines may become less effective in the face of rapid mutations.  

TIME TO GET SERIOUS ABOUT H5N1

The response to the H5N1 outbreak among dairy cows has revealed persistent weaknesses in U.S. public health preparedness, coordination failures among the animal and human health sectors, and a disconnect among agencies and between federal and state, tribal, local, and territorial jurisdictions. Recent policy and legislative advances have proven important but insufficient.

The U.S. government needs to significantly upgrade its engagement of governors, state and local leaders, and U.S. industry and provide additional resources to prepare for, detect, and respond to One Health threats like H5N1.

Although the risk of widespread human-to-human transmission of H5N1 in the United States currently appears to be low, the landscape could change rapidly. Four key actions are needed.

1. ENHANCE DISEASE TESTING AND SURVEILLANCE

Strengthening active testing and surveillance among farm workers and animals can improve situational awareness of where H5N1 is spreading and how it is evolving.

When H5N1 was detected in two poultry facilities in Colorado, the Colorado Department of Public Health & Environment (CDPHE) advised each facility to screen and test symptomatic workers for H5N1 infection before shifts. These enhanced testing practices provided greater situational awareness of which workers required outpatient medical care and minimized direct exposure between infected and healthy individuals. Other states and facilities can follow Colorado’s lead to mitigate possible spread into the community.

Congress should consider opportunities to continue support for wastewater surveillance programs that will run out of funding at the end of the year.

The CDC, ASPR, and other agencies should invest in R&D to expand the availability and diversity of commercial tests, negotiating advanced market commitments with industry to ensure a reliable and scalable supply.

2. ADVANCE THE DEVELOPMENT OF VACCINES AND THERAPIES

Although several influenza vaccines are currently under development, clinical trials are a lengthy process and manufacturing vaccines takes time. The U.S. government should work with vaccine manufacturers now to accelerate the development, approval, and manufacturing of influenza vaccines.

Specifically, a universal flu vaccine would heighten protection from all strains of influenza and could be developed utilizing the same mRNA technology as Covid-19 vaccines, which is faster to manufacture than traditional egg-based approaches.

Additional investment should also be made to expand the pipeline of new H5N1 therapies.

3. STRENGTHEN PROTECTIONS FOR FARM WORKERS

Farms should implement engineering controls such as proper ventilation, administrative controls such as testing symptomatic workers and animals, and PPE requirements like gloves and face shields to enhance biosafety and biosecurity and protect workers from infection. The movement of personnel, animals, and equipment between farms all increase the risk of the virus’s spread—farms should limit sharing these resources to mitigate that risk.

Educating farm owners and their employees on the imperative to implement enhanced biosafety and biosecurity measures is critical. Programs are already underway through CDC and community organizations to educate farm workers over social media and the radio, in multiple languages. The USDA and CDC should make additional resources available to scale this work in conjunction with state and community leaders.

4. WORK WITH GLOBAL PARTNERS

The United States is not alone in facing the rising threat of avian influenza. Several countries are reporting rising cases in wild birds and mammals, as well as troubling new human infections. The clumsy U.S. response has raised serious concerns from the World Health Organization (WHO) and partner countries and, indeed, threatens U.S. credibility.

The United States should signal to its international partners that it is stepping up its game and wishes to collaborate far more closely in tracking the outbreak and global changes in the virus itself. U.S. leaders could ask Canada and South Africa to use this year’s G7 and G20 presidencies to convene joint health and agricultural ministers’ meetings on animal health outbreaks. In turn, the United States should learn from successes in controlling previous avian influenza outbreaks elsewhere in the world, or from measures other countries are taking to reduce risk, such as making H5N1 vaccines available to farm workers.

DO NOT WAIT
FOR PANIC

It is not time to panic about bird flu. Nor is it the time for complacency and hoping the virus will burn itself out.

So long as H5N1 spreads unchecked, there is a risk that the virus will evolve into a major human pandemic. Preventing the health and economic disruptions of an emergency of that scale is critical for the stability and national security of the United States.

White House leadership will be essential to drive progress and overcome the divisions that have blocked an effective response.

There is an opportunity to make investments in health security infrastructure now to strengthen U.S. preparedness for the future. These investments in surveillance, in vaccines and therapies, and in One Health coordination will safeguard Americans from many more emerging threats than just H5N1 or influenza, generating tools and playbooks that will be needed for future emergencies.

This is a moment of vulnerability for the United States, as the new year will bring a transition in U.S. leadership in the presidency, Congress, and federal agencies.

Viruses continue to circulate during periods of both political turbulence and stability. Public health officials at all levels of government have the responsibility to ensure that the national response to emerging threats such as H5N1 remains a priority.

This report is made possible by the generous support of the Bill & Melinda Gates Foundation.

Authors

Michaela Simoneau, Associate Fellow, Global Health Policy Center
Sophia Hirshfield, Research Associate, Global Health Policy Center
Maclane Speer, Program Manager, Global Health Policy Center

Special Thanks

J. Stephen Morrison, Senior Vice President and Director, CSIS Global Health Policy Center

Luciana Borio, Senior Fellow for Global Health, Council on Foreign Relations; Venture Partner, ARCH Venture Partners; and Former Director for Biodefense Preparedness Policy, National Security Council

Elizabeth (Beth) Cameron, Senior Advisor to the Brown Pandemic Center and Professor of the Practice of Health Services, Policy and Practice, Brown University School of Public Health

Jennifer Nuzzo, Director, Pandemic Center and Professor of Epidemiology, Brown University School of Public Health

iDeas Lab Story Production

Editorial, design & production by: Shannon Yeung & Sarah Grace
Editorial & management by: Sarah Grace & Marla Hiller
Data visualizations by: Shannon Yeung
Development support by: José Romero
Copyediting support by: Kelsey Hartman

Photo Credits

Cover: 
Image: A dairy farmer shares a moment with a pregnant cow. | Modifications to photograph by Suzanne Kreiter/The Boston Globe via Getty Images
H5N1 Transmission:
Scrollmation: Human body vector illustration. | Modifications to illustration by Vikivector via Adobe Stock
Image: Patients infected with H1N1 recuperate in an emergency hospital in Camp Funston, Kansas, in the midst of the 1918 pandemic. | National Museum of Health and Medicine via Picryl
Tracking The Virus:
Wastewater Surveillance: Houston Health Dept. collecting wastewater samples. | Modifications to photograph by Elizabeth Conley/Houston Chronicle via Getty Images
Bulk Milk Testing: A research associate examining milk samples. | Modifications to photograph by David L. Ryan/The Boston Globe via Getty Images
RT-PCR Testing: A healthcare worker places a test swab into a solution. | Modifications to photograph by Patrick T. Fallon / AFP via Getty Images
Time to Get Serious about H5N1:
1. Enhance Disease Testing And Surveillance: A microbiologist tests poultry samples for bird flu. | Modifications to photograph by Scott Olson via Getty Images; Milk samples collected for testing the presence of bird flu. | Modifications to photograph by David L. Ryan/The Boston Globe via Getty Images
2. Advance the Development of Vaccines and Therapies: A syringe needle and generic vaccine vial. | Modifications to photograph by MargJohnsonVA via Adobe Stock
3. Strengthen Protections for Farm Workers: A veterinarian prepares farm chickens for vaccination. | Modifications to photograph by panyawat via Adobe Stock
4. Work with Global Partners: A rendering of Earth from space at night. | Modifications to illustration by panyawat via Adobe Stock